An A-Z Index of the Windows command line are as follows,
   ADDUSERS Add or list users to/from a CSV file   
   ARP      Address Resolution Protocol    
   ASSOC    Change file extension associations•    
   ASSOCIAT One step file association    
   ATTRIB   Change file attributes    
b    
   BOOTCFG  Edit Windows boot settings    
   BROWSTAT Get domain, browser and PDC info    
c    
   CACLS    Change file permissions    
   CALL     Call one batch program from another•    
   CD       Change Directory - move to a specific Folder•    
   CHANGE   Change Terminal Server Session properties    
   CHKDSK   Check Disk - check and repair disk problems    
   CHKNTFS  Check the NTFS file system    
   CHOICE   Accept keyboard input to a batch file    
   CIPHER   Encrypt or Decrypt files/folders    
   CleanMgr Automated cleanup of Temp files, recycle bin    
   CLEARMEM Clear memory leaks    
   CLIP     Copy STDIN to the Windows clipboard.    
   CLS      Clear the screen•    
   CLUSTER  Windows Clustering    
   CMD      Start a new CMD shell    
   COLOR    Change colors of the CMD window•    
   COMP     Compare the contents of two files or sets of files    
   COMPACT  Compress files or folders on an NTFS partition    
   COMPRESS Compress individual files on an NTFS partition    
   CON2PRT  Connect or disconnect a Printer    
   CONVERT  Convert a FAT drive to NTFS.    
   COPY     Copy one or more files to another location•    
   CSCcmd   Client-side caching (Offline Files)    
   CSVDE    Import or Export Active Directory data     
d    
   DATE     Display or set the date•    
   DEFRAG   Defragment hard drive    
   DEL      Delete one or more files•    
   DELPROF  Delete NT user profiles    
   DELTREE  Delete a folder and all subfolders    
   DevCon   Device Manager Command Line Utility     
   DIR      Display a list of files and folders•    
   DIRUSE   Display disk usage    
   DISKCOMP Compare the contents of two floppy disks    
   DISKCOPY Copy the contents of one floppy disk to another    
   DISKPART Disk Administration    
   DNSSTAT  DNS Statistics    
   DOSKEY   Edit command line, recall commands, and create macros    
   DSADD    Add items to active directory (user group computer)     
   DSQUERY  List items in active directory (user group computer)    
   DSMOD    Modify items in active directory (user group computer)    
   DSMOVE   Move an Active directory Object    
   DSRM     Remove items from Active Directory    
e    
   ECHO     Display message on screen•    
   ENDLOCAL End localisation of environment changes in a batch file•    
   ERASE    Delete one or more files•    
   EVENTCREATE Add a message to the Windows event log    
   EXIT     Quit the current script/routine and set an errorlevel•    
   EXPAND   Uncompress files    
   EXTRACT  Uncompress CAB files    
f    
   FC       Compare two files    
   FIND     Search for a text string in a file    
   FINDSTR  Search for strings in files    
   FOR /F   Loop command: against a set of files•    
   FOR /F   Loop command: against the results of another command•    
   FOR      Loop command: all options Files, Directory, List•    
   FORFILES Batch process multiple files    
   FORMAT   Format a disk    
   FREEDISK Check free disk space (in bytes)    
   FSUTIL   File and Volume utilities    
   FTP      File Transfer Protocol    
   FTYPE    Display or modify file types used in file extension associations•    
g    
   GLOBAL   Display membership of global groups    
   GOTO     Direct a batch program to jump to a labelled line•    
   GPUPDATE Update Group Policy settings    
h    
   HELP     Online Help    
i    
   iCACLS   Change file and folder permissions    
   IF       Conditionally perform a command•    
   IFMEMBER Is the current user in an NT Workgroup    
   IPCONFIG Configure IP    
k    
   KILL     Remove a program from memory    
l    
   LABEL    Edit a disk label    
   LOCAL    Display membership of local groups    
   LOGEVENT Write text to the NT event viewer    
   LOGOFF   Log a user off    
   LOGTIME  Log the date and time in a file    
m    
   MAPISEND Send email from the command line    
   MBSAcli  Baseline Security Analyzer.     
   MEM      Display memory usage    
   MD       Create new folders•    
   MKLINK   Create a symbolic link (linkd)    
   MODE     Configure a system device    
   MORE     Display output, one screen at a time    
   MOUNTVOL Manage a volume mount point    
   MOVE     Move files from one folder to another•    
   MOVEUSER Move a user from one domain to another    
   MSG      Send a message    
   MSIEXEC  Microsoft Windows Installer    
   MSINFO   Windows NT diagnostics    
   MSTSC    Terminal Server Connection (Remote Desktop Protocol)    
   MUNGE    Find and Replace text within file(s)    
   MV       Copy in-use files    
n    
   NET      Manage network resources    
   NETDOM   Domain Manager    
   NETSH    Configure Network Interfaces, Windows Firewall & Remote access    
   NETSVC   Command-line Service Controller    
   NBTSTAT  Display networking statistics (NetBIOS over TCP/IP)    
   NETSTAT  Display networking statistics (TCP/IP)    
   NOW      Display the current Date and Time     
   NSLOOKUP Name server lookup    
   NTBACKUP Backup folders to tape    
   NTRIGHTS Edit user account rights    
p    
   PATH     Display or set a search path for executable files•    
   PATHPING Trace route plus network latency and packet loss    
   PAUSE    Suspend processing of a batch file and display a message•    
   PERMS    Show permissions for a user    
   PERFMON  Performance Monitor    
   PING     Test a network connection    
   POPD     Restore the previous value of the current directory saved by PUSHD•    
   PORTQRY  Display the status of ports and services    
   POWERCFG Configure power settings    
   PRINT    Print a text file    
   PRNCNFG  Display, configure or rename a printer    
   PRNMNGR  Add, delete, list printers set the default printer    
   PROMPT   Change the command prompt•    
   PsExec     Execute process remotely    
   PsFile     Show files opened remotely    
   PsGetSid   Display the SID of a computer or a user    
   PsInfo     List information about a system    
   PsKill     Kill processes by name or process ID    
   PsList     List detailed information about processes    
   PsLoggedOn Who's logged on (locally or via resource sharing)    
   PsLogList  Event log records    
   PsPasswd   Change account password    
   PsService  View and control services    
   PsShutdown Shutdown or reboot a computer    
   PsSuspend  Suspend processes    
   PUSHD    Save and then change the current directory•    
q    
   QGREP    Search file(s) for lines that match a given pattern.    
r    
   RASDIAL  Manage RAS connections    
   RASPHONE Manage RAS connections    
   RECOVER  Recover a damaged file from a defective disk.    
   REG      Registry: Read, Set, Export, Delete keys and values    
   REGEDIT  Import or export registry settings    
   REGSVR32 Register or unregister a DLL    
   REGINI   Change Registry Permissions    
   REM      Record comments (remarks) in a batch file•    
   REN      Rename a file or files•    
   REPLACE  Replace or update one file with another    
   RD       Delete folder(s)•    
   RMTSHARE Share a folder or a printer    
   ROBOCOPY Robust File and Folder Copy    
   ROUTE    Manipulate network routing tables    
   RUNAS    Execute a program under a different user account    
   RUNDLL32 Run a DLL command (add/remove print connections)    
s    
   SC       Service Control    
   SCHTASKS Schedule a command to run at a specific time    
   SCLIST   Display NT Services    
   SET      Display, set, or remove environment variables•    
   SETLOCAL Control the visibility of environment variables•    
   SETX     Set environment variables permanently    
   SFC      System File Checker     
   SHARE    List or edit a file share or print share    
   SHIFT    Shift the position of replaceable parameters in a batch file•    
   SHORTCUT Create a windows shortcut (.LNK file)    
   SHOWGRPS List the NT Workgroups a user has joined    
   SHOWMBRS List the Users who are members of a Workgroup    
   SHUTDOWN Shutdown the computer    
   SLEEP    Wait for x seconds    
   SLMGR    Software Licensing Management (Vista/2008)    
   SOON     Schedule a command to run in the near future    
   SORT     Sort input    
   START    Start a program or command in a separate window•    
   SU       Switch User    
   SUBINACL Edit file and folder Permissions, Ownership and Domain    
   SUBST    Associate a path with a drive letter    
   SYSTEMINFO List system configuration    
t    
   TASKLIST List running applications and services    
   TASKKILL Remove a running process from memory    
   TIME     Display or set the system time•    
   TIMEOUT  Delay processing of a batch file    
   TITLE    Set the window title for a CMD.EXE session•    
   TLIST    Task list with full path    
   TOUCH    Change file timestamps    
   TRACERT  Trace route to a remote host    
   TREE     Graphical display of folder structure    
   TYPE     Display the contents of a text file•    
u    
   USRSTAT  List domain usernames and last login    
v    
   VER      Display version information•    
   VERIFY   Verify that files have been saved•    
   VOL      Display a disk label•    
w    
   WHERE    Locate and display files in a directory tree    
   WHOAMI   Output the current UserName and domain    
   WINDIFF  Compare the contents of two files or sets of files    
   WINMSD   Windows system diagnostics    
   WINMSDP  Windows system diagnostics II    
   WMIC     WMI Commands    
x    
   XCACLS   Change file and folder permissions    
   XCOPY    Copy files and folders    
   ::       Comment / Remark•
Commands marked • are Internal commands only available within the CMD shell.   
All other commands (not marked with •) are external commands which may be used under the CMD shell, PowerShell, or directly from START-RUN. 
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